Structure of PDB 5jjk Chain E

Receptor sequence
>5jjkE (length=356) Species: 83334 (Escherichia coli O157:H7) [Search protein sequence]
IFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIS
GKIFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMNGSTEDLTAR
VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLID
ERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDV
IILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEG
GSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTND
DFFEMM
3D structure
PDB5jjk Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
ChainE
Resolution3.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna E G282 V284 L285 G287 G288 G222 V224 L225 G227 G228
BS02 ADP E K181 A182 G183 K184 T185 M186 F355 K121 A122 G123 K124 T125 M126 F295
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008186 ATP-dependent activity, acting on RNA
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
Cellular Component
GO:0005829 cytosol
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5jjk, PDBe:5jjk, PDBj:5jjk
PDBsum5jjk
PubMed27856760
UniProtP0AG30|RHO_ECOLI Transcription termination factor Rho (Gene Name=rho)

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