Structure of PDB 5ef3 Chain E

Receptor sequence
>5ef3E (length=68) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
SDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIK
VRGKAYIQTRHGVIESEG
3D structure
PDB5ef3 RNA protects a nucleoprotein complex against radiation damage.
ChainE
Resolution1.98 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TRP E G23 H34 Q47 T49 T52 G17 H28 Q41 T43 T46
BS02 TRP E R26 G27 D29 T30 S53 R20 G21 D23 T24 S47
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5ef3, PDBe:5ef3, PDBj:5ef3
PDBsum5ef3
PubMed27139628
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

[Back to BioLiP]