Structure of PDB 5d2n Chain E

Receptor sequence

>5d2nE (length=245) Species: 9606 (Homo sapiens) [Search protein sequence]

GAGVSQSPRYKVTKRGQDVALRCDPISGHVSLYWYRQALGQGPEFLTYFN
YEAQQDKSGLPNDRFSAERPEGSISTLTIQRTEQRDSAMYRCASSLAPGT
TNEKLFFGSGTQLSVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLAT
GFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSA
TFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA

3D structure

PDB

5d2n Structural Basis for Clonal Diversity of the Public T Cell Response to a Dominant Human Cytomegalovirus Epitope.

Chain

Resolution

2.099 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	E	G99 T100	G99 T100

External links

PDB	RCSB:5d2n, PDBe:5d2n, PDBj:5d2n
PDBsum	5d2n
PubMed	26429912

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