Structure of PDB 5apr Chain E

Receptor sequence
>5aprE (length=325) Species: 4843 (Rhizopus microsporus var. chinensis) [Search protein sequence]
AGVGTVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTN
CGSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIK
GQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLIS
RPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVD
RATVGTSTVASSFDGILDTGTTLLILPNNIAASVARAYGASDNGDGTYTI
SCDTSAFKPLVFSINGASFQVSPDSLVFEEFQGQCIAGFGYGNWGFAIIG
DTFLKNNYVVFNQGVPEVQIAPVAE
3D structure
PDB5apr Structures of complexes of rhizopuspepsin with pepstatin and other statine-containing inhibitors.
ChainE
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.4.23.21: rhizopuspepsin.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide E I15 E16 D35 G37 Y77 G78 D79 I130 W194 D218 G220 T221 T222 W294 I298 I15 E16 D35 G37 Y77 G78 D79 I130 W194 D218 G220 T221 T222 W294 I298
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5apr, PDBe:5apr, PDBj:5apr
PDBsum5apr
PubMed1603809
UniProtP06026|CARP_RHICH Rhizopuspepsin

[Back to BioLiP]