Structure of PDB 5a8w Chain E

Receptor sequence
>5a8wE (length=442) Species: 145261 (Methanothermobacter wolfeii) [Search protein sequence]
PMYEDRVDLYGADGKLLEEDVPLEAVSPLKNPTIANLVSDVKRSVAVNLA
GIEGSLRKAALGGKSNFIPGREVDLPIVENAEAIAEKIKKLVQTSEDDDT
NIRLINNGQQILVQVPTTRMGVAADYTVSALVTGAAVVQAIIDEFDVDMF
DANAVKTAVMGRYPQTVDFTGANLSTLLGPPVLLEGLGYGLRNIMANHVV
AITRKNTLNASALSSILEQTAMFETGDAVGAFERMHLLGLAYQGLNANNL
LFDLVKENGKGTVGTVIASLVERAIEDRVIKVAKEMTSGYKMYEPADWAL
WNAYAATGLLAATIVNVGAARAAQGVASTVLYYNDILEYETGLPGVDFGR
AMGTAVGFSFFSHSIYGGGGPGIFHGNHVVTRHSKGFALPCVAAAMCLDA
GTQMFSVEKTSGLIGSVYSEIDYFREPIVNVAKGAAEIKDQL
3D structure
PDB5a8w Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
ChainE
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.8.4.1: coenzyme-B sulfoethylthiotransferase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 TP7 E Y367 G369 Y366 G368
BS02 F43 E I366 Y367 I365 Y366
BS03 COM E F361 Y367 F360 Y366
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0050524 coenzyme-B sulfoethylthiotransferase activity
Biological Process
GO:0015948 methanogenesis

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5a8w, PDBe:5a8w, PDBj:5a8w
PDBsum5a8w
PubMed27467699
UniProtA0A1C7D1E4

[Back to BioLiP]