Structure of PDB 4yoy Chain E

Receptor sequence
>4yoyE (length=224) Species: 53953 (Pyrococcus horikoshii) [Search protein sequence]
MRIVAADTGGAVLDESFQPVGLIATVAVLVEKPYKTSKRFLVKYADPYNY
DLSGRQAIRDEIELAIELAREVSPDVIHLNSTLGGIEVRKLDESTIDALQ
ISDRGKEIWKELSKDLQPLAKKFWEETGIEIIAIGKSSVPVRIAEIYAGI
FSVKWALDNVGGLLVGLPRYMEVEIKKDKIIGKSLDPREGGLYGEVKTEV
PQGIKWELYPNPLVRRFMVFEITS
3D structure
PDB4yoy Structural basis for substrate recognition and processive cleavage mechanisms of the trimeric exonuclease PhoExo I
ChainE
Resolution1.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna E D7 T8 G9 R55 N80 T82 S102 I108 G169 L170 P171 F220 D7 T8 G9 R55 N80 T82 S102 I108 G166 L167 P168 F217
BS02 MG E D7 E145 D7 E145
Gene Ontology
Molecular Function
GO:0004527 exonuclease activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4yoy, PDBe:4yoy, PDBj:4yoy
PDBsum4yoy
PubMed26138487
UniProtA0A060P168

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