Structure of PDB 4io9 Chain E

Receptor sequence
>4io9E (length=171) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
GKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVER
PSDAQKHRALHGLTRTLVANAVKGVSDGYTINLELRGVGFRAKLTGKALE
MNIGYSHPVIIEPPAGVTFAVPEPTRIDVSGIDKQLVGQVAANVRKVRKP
DAYHGKGVRFVGEQIALKAGK
3D structure
PDB4io9 Novel 3-O-carbamoyl erythromycin A derivatives (carbamolides) with activity against resistant staphylococcal and streptococcal isolates.
ChainE
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna E Q59 A63 G66 L67 T70 L71 N74 Y109 S110 H111 K138 Q139 G142 Q143 A146 K150 K153 Y157 H158 K160 K172 K175 Q55 A59 G62 L63 T66 L67 N70 Y105 S106 H107 K134 Q135 G138 Q139 A142 K146 K149 Y153 H154 K156 K168 K171
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4io9, PDBe:4io9, PDBj:4io9
PDBsum4io9
PubMed23414806
UniProtQ9RSL3|RL6_DEIRA Large ribosomal subunit protein uL6 (Gene Name=rplF)

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