Structure of PDB 3hki Chain E

Receptor sequence
>3hkiE (length=252) Species: 10090 (Mus musculus) [Search protein sequence]
IVEGWDAEKGIAPWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPW
DKNFTENDLLVRIGKHSRTRYERNVEKISMLEKIYVHPRYNWRENLDRDI
ALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNLRETWTN
EIQPSVLQVVNLPIVERPVCKASTRIRITDNMFCAGFKVNDTKRGDACEG
DSGGPFVMKSPFNNRWYQMGIVSAGAGCGKYGFYTHVFRLKRWIQKVIDQ
FG
3D structure
PDB3hki Mechanism of the Anticoagulant Activity of Thrombin Mutant W215A/E217A.
ChainE
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) H57 D102 E192 G193 D194 S195 G196
Catalytic site (residue number reindexed from 1) H43 D99 E199 G200 D201 S202 G203
Enzyme Commision number 3.4.21.5: thrombin.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide E F34 K36 R67 R73 T74 R75 Y76 I82 F19 K21 R62 R68 T69 R70 Y71 I78
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0005509 calcium ion binding
Biological Process
GO:0006508 proteolysis
GO:0007596 blood coagulation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3hki, PDBe:3hki, PDBj:3hki
PDBsum3hki
PubMed19586901
UniProtP19221|THRB_MOUSE Prothrombin (Gene Name=F2)

[Back to BioLiP]