Structure of PDB 3d2u Chain E

Receptor sequence
>3d2uE (length=279) Species: 10359 (Human betaherpesvirus 5) [Search protein sequence]
VLRYGYTGIFDDTSHMTLTVVGIFDGQHFFTYHVQSSDKASSRANGTISW
MANVSAAYPTYLDGERAKGDLIFNQTEQNLLELEIALGYRSQSVLTWTHE
CNTTENGSFVAGYEGFGWDGETLMELKDNLTLWTGPNYEISWLKQQKTYI
DGKIKNISEGDTTIQRNYLKGNCTQWSVIYSGFQPPVTHPVVKGGVRNQN
DNRAEAFCTSYGFFPGEIQITFIHYGDKVPEDSEPQCNPLLPTLDGTFHQ
GCYVAIFSNQNYTCRVTHGNWTVEIPISV
3D structure
PDB3d2u Structure of UL18, a peptide-binding viral MHC mimic, bound to a host inhibitory receptor
ChainE
Resolution2.21 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide E Y5 E66 K69 I73 Q76 N80 E83 W98 H100 M125 W134 Q166 Y169 W177 Y181 Y4 E65 K68 I72 Q75 N79 E82 W97 H99 M124 W133 Q165 Y168 W176 Y180
External links
PDB RCSB:3d2u, PDBe:3d2u, PDBj:3d2u
PDBsum3d2u
PubMed18632577
UniProtP08560|UL18_HCMVA Glycoprotein UL18 (Gene Name=H301)

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