Structure of PDB 3ayw Chain E

Receptor sequence
>3aywE (length=97) Species: 9606 (Homo sapiens) [Search protein sequence]
KPHRYRPGTVALREIRRYQQSTELLIRKLPFQRLVREIAQDFKTDLRFQS
SAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE
3D structure
PDB3ayw Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains
ChainE
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna E H39 R40 Y41 G44 T45 V46 A47 R49 R63 K64 L65 R69 R83 H3 R4 Y5 G8 T9 V10 A11 R13 R27 K28 L29 R33 R47
BS02 dna E R42 T45 R63 R72 R83 F84 Q85 R116 V117 T118 R6 T9 R27 R36 R47 F48 Q49 R80 V81 T82
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0045296 cadherin binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0010467 gene expression
GO:0032200 telomere organization
GO:0040029 epigenetic regulation of gene expression
Cellular Component
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0016020 membrane
GO:0032991 protein-containing complex
GO:0070062 extracellular exosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:3ayw, PDBe:3ayw, PDBj:3ayw
PDBsum3ayw
PubMed21812398
UniProtP68431|H31_HUMAN Histone H3.1 (Gene Name=H3C1)

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