Structure of PDB 2vq1 Chain E

Receptor sequence

>2vq1E (length=216) Species: 10090 (Mus musculus) [Search protein sequence]

DVVMTQTPLSLSVSLGDQASISCRSSQSLVHSNGNTFLQWYLQKPGQSPK
LLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRMEAEDLGIYFCSQTTHVP
WTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN
VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCE
ATHKTSTSPIVKSFNR

3D structure

PDB

2vq1 Characterization of a Diagnostic Fab Fragment Binding Trimeric Lewis X.

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	GLY	E	L160 S176 T178	L165 S181 T183
BS02	GLY	E	K39 K45 E81	K44 K50 E86
BS03	GLY	E	F32 T91	F37 T96

External links

PDB	RCSB:2vq1, PDBe:2vq1, PDBj:2vq1
PDBsum	2vq1
PubMed	19173313

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