Structure of PDB 1khr Chain E

Receptor sequence
>1khrE (length=204) Species: 1352 (Enterococcus faecium) [Search protein sequence]
GPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQIL
YHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKH
MPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIA
PYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSI
IREV
3D structure
PDB1khr Crystal structure of Vat(D): an acetyltransferase that inactivates streptogramin group A antibiotics.
ChainE
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 COA E A80 M84 M129 V147 P160 A79 M83 M128 V146 P159
BS02 VIR E G79 N81 N92 P103 G78 N80 N91 P102
BS03 COA E G123 A141 A142 L155 G157 G158 I164 G122 A140 A141 L154 G156 G157 I163
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016746 acyltransferase activity
Biological Process
GO:0046677 response to antibiotic

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Molecular Function
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Biological Process
External links
PDB RCSB:1khr, PDBe:1khr, PDBj:1khr
PDBsum1khr
PubMed11841212
UniProtP50870|VATD_ENTFC Streptogramin A acetyltransferase (Gene Name=vatD)

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