Structure of PDB 1ga5 Chain E

Receptor sequence
>1ga5E (length=81) Species: 9606 (Homo sapiens) [Search protein sequence]
VLLCKVCGDVASGFHYGVLACEGCKGFFRRSIQQNIQYKRCLKNENCSIV
RINRNRCQQCRFKKCLSVGMSRDAVRFGRIP
3D structure
PDB1ga5 DNA Deformability as a Recognition Feature in the RevErb Response Element
ChainE
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna E F11 H12 Y13 K22 R26 R68 V71 R72 F73 G74 R75 I76 F14 H15 Y16 K25 R29 R72 V75 R76 F77 G78 R79 I80
BS02 dna E E19 F24 R27 R50 N51 Q54 R57 F73 G74 R75 P77 E22 F27 R30 R54 N55 Q58 R61 F77 G78 R79 P81
BS03 ZN E C1 C4 C18 C4 C7 C21
BS04 ZN E C37 C53 C56 C41 C57 C60
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1ga5, PDBe:1ga5, PDBj:1ga5
PDBsum1ga5
PubMed11669620
UniProtP20393|NR1D1_HUMAN Nuclear receptor subfamily 1 group D member 1 (Gene Name=NR1D1)

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