Structure of PDB 4v99 Chain Do

Receptor sequence
>4v99Do (length=185) Species: 652599 (Panicum mosaic virus strain Kansas 109S) [Search protein sequence]
QGWQKLSHEEIILQVNSSTAADTIQTIPIIPRLSVPAGDKPIYSGSAPHL
RTIGSAFAIHRWRALSFEWIPSCPTTTPGNLVLRFYPNYSTETPKTLTDL
MDSESLVLVPSLSGKTYRPKIETRGNPPELRNIDATAFSALSDEDKGDYS
VGRLVVGSSKQAVVIQLGLLRMRYSAEMRGATSIS
3D structure
PDB4v99 The crystallographic structure of Panicum Mosaic Virus (PMV).
ChainDo
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Do Q54 W56 K58 S60 R116 L118 R171 E230 Q1 W3 K5 S7 R63 L65 R118 E177
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039617 T=3 icosahedral viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4v99, PDBe:4v99, PDBj:4v99
PDBsum4v99
PubMed23123270
UniProtP89036|CAPSD_PMVK Capsid protein (Gene Name=ORF3)

[Back to BioLiP]