Structure of PDB 4v9s Chain DX

Receptor sequence
>4v9sDX (length=95) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MKTAYDVILAPVLSEKAYAGFAEGKYTFWVHPKATKTEIKNAVETAFKVK
VVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGL
3D structure
PDB4v9s The antibiotics dityromycin and GE82832 bind protein S12 and block EF-G-catalyzed translocation.
ChainDX
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DX M1 K2 S14 K16 K25 H31 T35 K36 T37 E38 K40 N41 N55 T56 L57 H58 R60 K62 K63 K64 R65 L66 Y69 G71 K72 R73 P74 D75 K77 K78 I80 M1 K2 S14 K16 K25 H31 T35 K36 T37 E38 K40 N41 N55 T56 L57 H58 R60 K62 K63 K64 R65 L66 Y69 G71 K72 R73 P74 D75 K77 K78 I80
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v9s, PDBe:4v9s, PDBj:4v9s
PDBsum4v9s
PubMed24412368
UniProtQ5SHP0|RL23_THET8 Large ribosomal subunit protein uL23 (Gene Name=rplW)

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