Structure of PDB 4v6d Chain DX

Receptor sequence
>4v6dDX (length=77) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRV
SAKGMRVIDKKGIDTVLAELRARGEKY
3D structure
PDB4v6d Structures of the ribosome in intermediate States of ratcheting.
ChainDX
Resolution3.814 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DX S1 R2 K9 R10 T13 N15 R17 S18 H19 A20 N22 K25 R26 R27 F28 L29 P30 N31 H35 R36 R44 A52 R56 K60 K61 S1 R2 K9 R10 T13 N15 R17 S18 H19 A20 N22 K25 R26 R27 F28 L29 P30 N31 H35 R36 R44 A52 R56 K60 K61
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v6d, PDBe:4v6d, PDBj:4v6d
PDBsum4v6d
PubMed19696352
UniProtP0A7M2|RL28_ECOLI Large ribosomal subunit protein bL28 (Gene Name=rpmB)

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