Structure of PDB 4v8d Chain DU

Receptor sequence
>4v8dDU (length=102) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
RVKMHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVRV
SPKYPQGGFIEKEAPLHASKVRPICPACGKPTRVRKKFLENGKKIRVCAK
CG
3D structure
PDB4v8d A new understanding of the decoding principle on the ribosome.
ChainDU
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DU R2 K8 K9 S17 G18 K19 V30 P32 I44 V45 K46 K47 A48 V49 K54 F60 H68 S70 K71 R73 R84 V85 E91 R1 K7 K8 S16 G17 K18 V29 P31 I43 V44 K45 K46 A47 V48 K53 F59 H67 S69 K70 R72 R83 V84 E90
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v8d, PDBe:4v8d, PDBj:4v8d
PDBsum4v8d
PubMed22437501
UniProtQ5SHP9|RL24_THET8 Large ribosomal subunit protein uL24 (Gene Name=rplX)

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