Structure of PDB 4v6d Chain DT

Receptor sequence
>4v6dDT (length=93) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKL
FEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNL
3D structure
PDB4v6d Structures of the ribosome in intermediate States of ratcheting.
ChainDT
Resolution3.814 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DT M1 I2 R3 H15 S17 E18 K19 M24 K36 K40 N59 T60 L61 V62 K64 K66 K68 R69 H70 Q72 R73 G75 R76 R77 S78 K82 Y84 M1 I2 R3 H15 S17 E18 K19 M24 K36 K40 N59 T60 L61 V62 K64 K66 K68 R69 H70 Q72 R73 G75 R76 R77 S78 K82 Y84
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v6d, PDBe:4v6d, PDBj:4v6d
PDBsum4v6d
PubMed19696352
UniProtP0ADZ0|RL23_ECOLI Large ribosomal subunit protein uL23 (Gene Name=rplW)

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