Structure of PDB 6zqa Chain DQ

Receptor sequence
>6zqaDQ (length=125) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
AVPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPL
LLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSK
NELKKAFTSYDRTLLIADSRRPEPK
3D structure
PDB6zqa 90 S pre-ribosome transformation into the primordial 40 S subunit.
ChainDQ
Resolution4.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DQ H21 K26 H19 K24
BS02 rna DQ G71 G72 G73 S76 P124 G69 G70 G71 S74 P122
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412 translation
GO:0006413 translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6zqa, PDBe:6zqa, PDBj:6zqa
PDBsum6zqa
PubMed32943521
UniProtP0CX51|RS16A_YEAST Small ribosomal subunit protein uS9A (Gene Name=RPS16A)

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