Structure of PDB 4v9q Chain DP

Receptor sequence
>4v9qDP (length=83) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLK
VDVERARYWLSVGAQPTDTARRLLRQAGVFRQE
3D structure
PDB4v9q Blasticidin S inhibits translation by trapping deformed tRNA on the ribosome.
ChainDP
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DP M1 K3 R5 L6 R8 G10 S11 K12 H13 H16 Y17 D23 R25 K27 R28 K31 I33 Y38 P41 R42 K43 T44 T45 G63 Q65 T67 T69 R72 R75 F80 R81 Q82 M1 K3 R5 L6 R8 G10 S11 K12 H13 H16 Y17 D23 R25 K27 R28 K31 I33 Y38 P41 R42 K43 T44 T45 G63 Q65 T67 T69 R72 R75 F80 R81 Q82
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v9q, PDBe:4v9q, PDBj:4v9q
PDBsum4v9q
PubMed23824292
UniProtP62238|RS16_THET2 Small ribosomal subunit protein bS16 (Gene Name=rpsP)

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