Structure of PDB 4v4q Chain DP

Receptor sequence
>4v4qDP (length=114) Species: 562 (Escherichia coli) [Search protein sequence]
SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIR
NRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLR
ERTGKAARIKERLN
3D structure
PDB4v4q Structures of the bacterial ribosome at 3.5 A resolution.
ChainDP
Resolution3.46 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DP E43 K105 A106 R108 K110 E43 K105 A106 R108 K110
BS02 rna DP N2 R52 G53 L54 H55 T59 K62 Q74 K95 L96 Y97 Y98 R100 N2 R52 G53 L54 H55 T59 K62 Q74 K95 L96 Y97 Y98 R100
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v4q, PDBe:4v4q, PDBj:4v4q
PDBsum4v4q
PubMed16272117
UniProtP0A7K6|RL19_ECOLI Large ribosomal subunit protein bL19 (Gene Name=rplS)

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