Structure of PDB 4v83 Chain DK

Receptor sequence
>4v83DK (length=122) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRG
AVKEGDVVKAVVVRTKKEVKRPDGSAIRFDDNAAVIINNQLEPRGTRVFG
PVARELREKGFMKIVSLAPEVL
3D structure
PDB4v83 Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome.
ChainDK
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DK P48 R49 R97 P48 R49 R97
BS02 rna DK M1 Q3 Q5 T6 I22 R23 L25 K26 S28 N29 A30 K31 Y32 V40 S42 K44 G55 V57 K66 K67 E68 K70 M1 Q3 Q5 T6 I22 R23 L25 K26 S28 N29 A30 K31 Y32 V40 S42 K44 G55 V57 K66 K67 E68 K70
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v83, PDBe:4v83, PDBj:4v83
PDBsum4v83
PubMed21245352
UniProtQ72I14|RL14_THET2 Large ribosomal subunit protein uL14 (Gene Name=rplN)

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