Structure of PDB 4v7p Chain DK

Receptor sequence
>4v7pDK (length=119) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYA
AQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVD
DTPVPHNGCRPKKKFRKAS
3D structure
PDB4v7p Recognition of the amber UAG stop codon by release factor RF1.
ChainDK
Resolution3.62 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DK Y20 N26 N27 I29 G37 P39 W42 G46 K51 G52 S53 K55 R85 P115 H116 N117 G118 C119 R120 K123 K124 Y10 N16 N17 I19 G27 P29 W32 G36 K41 G42 S43 K45 R75 P105 H106 N107 G108 C109 R110 K113 K114
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v7p, PDBe:4v7p, PDBj:4v7p
PDBsum4v7p
PubMed20588254
UniProtP62654|RS11_THET2 Small ribosomal subunit protein uS11 (Gene Name=rpsK)

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