Structure of PDB 6hiv Chain DH

Receptor sequence
>6hivDH (length=564) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
MLSQNVAKTTVPSYYMIRTNLPHRKPQNQWEGVYYYSGITKRQRHLILLH
RKREREAHMRSFNISRASVLQRLEQLSGDRKQESLPPHVRLDLAVRLAQH
GLYQQATPIVDELHHQKALHAGHYALLINALACPRLGQRILHCDAQCDPA
LTYKLLGDENGEERAQEAYRWFDLALTSLAVDCGHFVPYLPQGTAAASHI
TNALMRTLLTCGYTHVAAIPDSVYDRMGSMGISPTISTYELVMLALSLQG
NMVEAESILSFLRSHHSEHITVESFNALLLGHREARQFDCCDAIWQELVD
RRWPRASPLTAELYLRSIMDHANTPTSEPLQSFANINVVEKKKVPLVLAQ
MDELGVPRTHLSRVLMDEVEDSLRKFQTYRSRFYEWGRAVKQFDFIEFRR
RNGWLYDLHLMKCTTKQVGPLRDFNDPDAVQGAVATAEIPAFFNERPAWE
RPPLEETLYVTTNKERYDDVRGGDIYYDDTRGLHDRSPTWMNEVPETRYD
RLYGVNHPDIAKIGIRRHLNVEYVNRKEVVERDAALMKKTLSSGRRLRHR
VESSRTHRNAGSLS
3D structure
PDB6hiv Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
ChainDH
Resolution7.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DH Y14 R18 Q43 Y385 S387 R388 V396 K397 D400 Y14 R18 Q43 Y379 S381 R382 V390 K391 D394
Gene Ontology
Biological Process
GO:0006396 RNA processing
GO:0007005 mitochondrion organization
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6hiv, PDBe:6hiv, PDBj:6hiv
PDBsum6hiv
PubMed30213880
UniProtQ580V1

[Back to BioLiP]