Structure of PDB 8qkt Chain DDD

Receptor sequence
>8qktDDD (length=96) Species: 9606 (Homo sapiens) [Search protein sequence]
RKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEAS
RLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
3D structure
PDB8qkt Engineering nucleosomes for generating diverse chromatin assemblies.
ChainDDD
Resolution3.261 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna DDD S29 Y39 G50 I51 S52 S53 R83 S84 T85 S4 Y14 G25 I26 S27 S28 R58 S59 T60
BS02 dna DDD K27 R28 R30 K31 I36 Y37 K2 R3 R5 K6 I11 Y12
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8qkt, PDBe:8qkt, PDBj:8qkt
PDBsum8qkt
PubMed
UniProtP06899|H2B1J_HUMAN Histone H2B type 1-J (Gene Name=H2BC11)

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