Structure of PDB 8oeq Chain DD

Receptor sequence

>8oeqDD (length=140) Species: 5476 (Candida albicans) [Search protein sequence]

STQSVQTFGKKKTATAVAHVKAGKGLIKINGSPITLVQPEILRFKVYEPL
TLVGLDKFQGIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEASK
NELKKIFASYDKTLLVADSRRMEPKKFGGRGARARFQKSY

3D structure

PDB

8oeq Drug-induced rotational movement of the ribosome is a key factor for read-through enhancement

Chain

Resolution

3.3 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	DD	Q7 T8 F9 K11 K12 K13 T14 V18 H20 L27 K29 G32 R65 G70 G71 G72 H73 V74 S75 K113 V117 S120 R121 R122 M123 E124 P125 K126 K127 F128 G129 R131 A133 R134 A135 F137 Q138 K139 S140 Y141	Q6 T7 F8 K10 K11 K12 T13 V17 H19 L26 K28 G31 R64 G69 G70 G71 H72 V73 S74 K112 V116 S119 R120 R121 M122 E123 P124 K125 K126 F127 G128 R130 A132 R133 A134 F136 Q137 K138 S139 Y140

External links

PDB	RCSB:8oeq, PDBe:8oeq, PDBj:8oeq
PDBsum	8oeq
PubMed
UniProt	O94017\|RS16_CANAX Small ribosomal subunit protein uS9 (Gene Name=RPS16)