Structure of PDB 4v6a Chain DC

Receptor sequence
>4v6aDC (length=220) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
RALLEKVDPNKVYTIDEAARLVKELATAKFDETVEVHAKLGIDPRRSDQN
VRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGW
MDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIK
AGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT
FRSVYVTTTMGPSVRINPHS
3D structure
PDB4v6a Formation of the first peptide bond: the structure of EF-P bound to the 70S ribosome.
ChainDC
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna DC A36 K37 F38 T41 E43 H45 K47 R130 R135 D167 T169 A171 H173 A174 P175 G207 T208 Y214 T216 T218 M219 G220 P221 S222 A28 K29 F30 T33 E35 H37 K39 R122 R127 D159 T161 A163 H165 A166 P167 G199 T200 Y205 T207 T209 M210 G211 P212 S213
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
GO:0006417 regulation of translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v6a, PDBe:4v6a, PDBj:4v6a
PDBsum4v6a
PubMed19696344
UniProtQ5SLP7|RL1_THET8 Large ribosomal subunit protein uL1 (Gene Name=rplA)

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