Structure of PDB 4v6a Chain D9

Receptor sequence
>4v6aD9 (length=36) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KVRASVKRICDKCKVIRRHGRVYVICENPKHKQRQG
3D structure
PDB4v6a Formation of the first peptide bond: the structure of EF-P bound to the 70S ribosome.
ChainD9
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D9 K2 R4 A5 S6 V7 K8 I10 K15 V16 R18 R19 H20 V23 P30 K31 K33 R35 Q36 G37 K1 R3 A4 S5 V6 K7 I9 K14 V15 R17 R18 H19 V22 P29 K30 K32 R34 Q35 G36
BS02 ZN D9 C11 C14 C27 C10 C13 C26
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:4v6a, PDBe:4v6a, PDBj:4v6a
PDBsum4v6a
PubMed19696344
UniProtQ5SHR2|RL36_THET8 Large ribosomal subunit protein bL36 (Gene Name=rpmJ)

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