Structure of PDB 4v7z Chain D8

Receptor sequence
>4v7zD8 (length=63) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLA
KPEAERIKLLLPY
3D structure
PDB4v7z Revisiting the structures of several antibiotics bound to the bacterial ribosome.
ChainD8
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D8 P2 K3 M4 K5 T6 H7 K8 K12 R13 T17 A18 S19 K21 K26 T27 G28 K29 R30 H31 L32 N33 Q35 I41 R42 R46 F48 V49 K52 L61 L62 Y64 P1 K2 M3 K4 T5 H6 K7 K11 R12 T16 A17 S18 K20 K25 T26 G27 K28 R29 H30 L31 N32 Q34 I40 R41 R45 F47 V48 K51 L60 L61 Y63
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v7z, PDBe:4v7z, PDBj:4v7z
PDBsum4v7z
PubMed20876130
UniProtQ5SKU1|RL35_THET8 Large ribosomal subunit protein bL35 (Gene Name=rpmI)

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