Structure of PDB 4v4h Chain D4
Receptor sequence
>4v4hD4 (length=38) Species:
562
(Escherichia coli) [
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MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
3D structure
PDB
4v4h
Structural analysis of kasugamycin inhibition of translation.
Chain
D4
Resolution
3.46 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
D4
M1 K2 A5 S6 V7 K8 I16 K18 R19 K32 K34 R36 G38
M1 K2 A5 S6 V7 K8 I16 K18 R19 K32 K34 R36 G38
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4v4h
,
PDBe:4v4h
,
PDBj:4v4h
PDBsum
4v4h
PubMed
16998486
UniProt
P0A7Q6
|RL36_ECOLI Large ribosomal subunit protein bL36A (Gene Name=rpmJ)
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