Structure of PDB 4v4q Chain D3
Receptor sequence
>4v4qD3 (length=64) Species:
562
(Escherichia coli) [
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PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVS
KGDLGLVIACLPYA
3D structure
PDB
4v4q
Structures of the bacterial ribosome at 3.5 A resolution.
Chain
D3
Resolution
3.46 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
D3
K2 I3 V6 R7 K11 T16 G17 K18 K22 H23 H25 A26 N27 R29 H30 I31 L32 K34 K35 T37 K38 R39 K40 R41 R44 K51
K2 I3 V6 R7 K11 T16 G17 K18 K22 H23 H25 A26 N27 R29 H30 I31 L32 K34 K35 T37 K38 R39 K40 R41 R44 K51
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4v4q
,
PDBe:4v4q
,
PDBj:4v4q
PDBsum
4v4q
PubMed
16272117
UniProt
P0A7Q1
|RL35_ECOLI Large ribosomal subunit protein bL35 (Gene Name=rpmI)
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