Structure of PDB 4v7u Chain D1

Receptor sequence
>4v7uD1 (length=50) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
GIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAK
3D structure
PDB4v7u Structures of the Escherichia coli ribosome with antibiotics bound near the peptidyl transferase center explain spectra of drug action.
ChainD1
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D1 G3 R5 K7 F19 Y20 T22 T23 K29 L33 L35 K36 F38 Q44 H45 G1 R3 K5 F17 Y18 T20 T21 K27 L31 L33 K34 F36 Q42 H43
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0046677 response to antibiotic
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v7u, PDBe:4v7u, PDBj:4v7u
PDBsum4v7u
PubMed20876128
UniProtP0A7N9|RL33_ECOLI Large ribosomal subunit protein bL33 (Gene Name=rpmG)

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