Structure of PDB 9ev6 Chain D

Receptor sequence

>9ev6D (length=537) Species: 196627 (Corynebacterium glutamicum ATCC 13032)

AHSYAEQLIDTLEAQGVKRIYGLVGDSLNPIVDAVRQSDIEWVHVRNEEA
AAFAAGAESLITGELAVCAASCGPGNTHLIQGLYDSHRNGAKVLAIASHI
PSAQIGSTFFQETHPEILFKECSGYCEMVNGGEQGERILHHAIQSTMAGK
GVSVVVIPGDIAKEDAGDGTYSNSTISSGTPVVFPDPTEAAALVEAINNA
KSVTLFCGAGVKNARAQVLELAEKIKSPIGHALGGKQYIQHENPFEVGMS
GLLGYGACVDASNEADLLILLGTDFPYSDFLPKDNVAQVDINGAHIGRRT
TVKYPVTGDVAATIENILPHVKEKTDRSFLDRMLKAHERKLSSVVETYTH
NVEKHVPIHPEYVASILNELADKDAVFTVDTGMCNVWHARYIENPEGTRD
FVGSFRHGTMANALPHAIGAQSVDRNRQVIAMCGDGGLGMLLGELLTVKL
HQLPLKAVVFNNSSLGMVKLEMLVEGQPEFGTDHEEVNFAEIAAAAGIKS
VRITDPKKVREQLAEALAYPGPVLIDIVTDPNALSIP

3D structure

• PDB: 9ev6 Corynebacterium glutamicum pyruvate:quinone oxidoreductase: an enigmatic metabolic enzyme with unusual structural features.
• Chain: D
• Resolution: 1.891 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	TPP	D	E49 S72 P75 G76 H79	E48 S71 P74 G75 H78
BS02	FAD	D	G209 A210 G211 A233 L234 G235 M250 G252 L254 G273 T274 D275 F276 Y278 D291 I292 H296 D310 V311 N386 F406 R407	G208 A209 G210 A232 L233 G234 M249 G251 L253 G272 T273 D274 F275 Y277 D290 I291 H295 D309 V310 N385 F405 R406
BS03	TPP	D	M384 M411 G435 D436 G437 N463 S465 L466 G467 M468 V469	M383 M410 G434 D435 G436 N462 S464 L465 G466 M467 V468
BS04	MG	D	D436 N463 S465	D435 N462 S464

External links

• PDB: RCSB:9ev6, PDBe:9ev6, PDBj:9ev6
• PDBsum: 9ev6
• PubMed: 39080980
• UniProt: Q8NMG5