Structure of PDB 9cl9 Chain D

Receptor sequence
>9cl9D (length=157) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQV
TTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVEL
FADVKKVDVTGTSKNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLI
VKPAVKA
3D structure
PDB9cl9 50S ribosome assembly intermediates at low temperature reveal bound RluB
ChainD
Resolution5.04 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D N42 K56 N58 P63 G66 H67 R169 S174 G191 A192 N42 K56 N58 P63 G66 H67 R117 S122 G139 A140
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:9cl9, PDBe:9cl9, PDBj:9cl9
PDBsum9cl9
PubMed
UniProtP60438|RL3_ECOLI Large ribosomal subunit protein uL3 (Gene Name=rplC)

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