Structure of PDB 9bnj Chain D

Receptor sequence
>9bnjD (length=465) Species: 585 (Proteus vulgaris) [Search protein sequence]
AKRIVEPFRIKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTD
SGTNAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNYDYIIPAHQGR
GAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVT
EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPV
SMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIF
DMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTY
GGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTG
GHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPA
TGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFATLKGLEFEY
EPPVLRHFTARLKPI
3D structure
PDB9bnj Proteus vulgaris tryptophan indole-lyase aminoacrylate complex with benzimidazole
ChainD
Resolution1.51 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.99.1: tryptophanase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BZI D F37 F132 D133 V389 R414 F459 F36 F131 D132 V388 R413 F458
BS02 0JO D T50 Q99 G100 R101 F132 N194 D223 R226 S263 K266 R414 T49 Q98 G99 R100 F131 N193 D222 R225 S262 K265 R413
Gene Ontology
Molecular Function
GO:0009034 tryptophanase activity
GO:0016829 lyase activity
Biological Process
GO:0006569 tryptophan catabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:9bnj, PDBe:9bnj, PDBj:9bnj
PDBsum9bnj
PubMed
UniProtP28796|TNAA_PROVU Tryptophanase (Gene Name=tnaA)

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