Structure of PDB 8yod Chain D

Receptor sequence
>8yodD (length=592) Species: 10666 (Enterobacteria phage T6) [Search protein sequence]
MIKNEIKILSDIEHIKKRSGMYIGSSANEMHERFLFGKWESVQYVPGLVK
LIDEIIDNSVDEGIRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTP
TGEEIPGPVAAWTIPKAGGNFGDDKERVTGGMNGVGSSLTNIFSVMFVGE
TGDGQNNIVVRCSNGMENKSWETIPGKWKGTRVTFIPDFMSFETNELSQV
YLDITLDRLQTLAVVYPDIQFTFNGKKVQGNFKKYARQYDEHAIVQEQEN
CSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCVMDDICEDLIPQIKRKFK
IDVTKARVKECLTIVMFVRDMKNMRFDSQTKERLTSPFGEIRSHIQLDAK
KISRAILNNEAILMPIIEAALARKLAAEKAAETKAAKKASKAKVHKHIKA
NLCGKDADTTLFLTEGDSAIGYLIDVRDKELHGGYPLRGKVLNSWGMSYA
DMLKNKELFDICAITGLVLGEKAENLNYHNIAIMTDADHDGLGSIYPSLL
GFFSNWPELFEQGRIRFVKTPVIIAHVGKKQEWFYTVAEYESAKDALPKH
SIRYIKGLGSLEKSEYREMIQNPVYDVVKLPENWKELFEMLM
3D structure
PDB8yod structure of phage T6 apo full-length topoisomerase II
ChainD
Resolution6.8 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ANP D N58 I92 A111 W112 A117 G118 N120 G131 M132 N133 G134 V135 G136 S137 N58 I92 A111 W112 A117 G118 N120 G131 M132 N133 G134 V135 G136 S137
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