Structure of PDB 8yhd Chain D

Receptor sequence

>8yhdD (length=199) Species: 256318 (metagenome) [Search protein sequence]

AKTMKKIYVTMKTLSPLYTGEVRREDKEAAQKRVNFPVRKTATNKVLIPF
KGALRSALEIMLKAKGENVCDTGESRARPCGRCVTCSLFGSMGRAGRASV
DFLISNDTKEQIVRESTHLRIERQTKSASDTFKGEEVIEGATFTATITIS
NPQEKDLSLIQSALKFIEENGIGGWLNKGYGRVSFEVKSEDVATDRFLK

3D structure

PDB

8yhd Structural basis for the activity of the type VII CRISPR-Cas system.

Chain

Resolution

2.93 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	D	G21 F37 K52 G53 R56 S57 P80 F90 G91 S92 M93 A96 T118 L120 R121 I122 R124 K127 A129 F133 G175 W176	G20 F36 K51 G52 R55 S56 P79 F89 G90 S91 M92 A95 T117 L119 R120 I121 R123 K126 A128 F132 G174 W175
BS02	rna	D	N36 F37 R77 T118 D131 T132 F133 K134	N35 F36 R76 T117 D130 T131 F132 K133
BS03	ZN	D	C71 C84	C70 C83

External links

PDB	RCSB:8yhd, PDBe:8yhd, PDBj:8yhd
PDBsum	8yhd
PubMed	39143216

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