Structure of PDB 8y74 Chain D

Receptor sequence

>8y74D (length=269) Species: 9031 (Gallus gallus) [Search protein sequence]

MELHTLRYIRTAMTDPGPGLPWYVDVGYVDGELFVHYNSTARRYVPRTEW
IAAKADQQYWDGQTQIGQGNEQIDRENLGILQRRYNQTGGSHTVQWMYGC
DILEGGPIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEGYA
EGLKQYLEETCVEWLRRYVEYGKAELGRRERPEVRVWGKEADGILTLSCR
AHGFYPRPIVVSWLKDGAVRDAHSGGIVPNGDGTYHTWVTIDAQPGDGDK
YQCRVEHASLPQPGLYSWE

3D structure

PDB

8y74 Revealing novel and conservative T-cell epitopes with MHC B2 restriction on H9N2 avian influenza virus (AIV).

Chain

Resolution

1.9 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	Y7 R9 Y43 Y58 Q62 I65 N69 I72 D73 N76 I79 R83 Y97 T140 K143 W144 Y149 Y156 W164 Y168	Y8 R10 Y44 Y59 Q63 I66 N70 I73 D74 N77 I80 R84 Y98 T141 K144 W145 Y149 Y156 W164 Y168

External links

PDB	RCSB:8y74, PDBe:8y74, PDBj:8y74
PDBsum	8y74
PubMed	38768812
UniProt	O46789

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