Structure of PDB 8xaw Chain D

Receptor sequence
>8xawD (length=563) Species: 562 (Escherichia coli) [Search protein sequence]
NDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLA
IIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAK
LDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTG
SGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLN
VDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDP
ATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDN
ENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSK
SVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGY
HSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEG
RKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDIT
NLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRKEWVD
SEFDKIIEQWSKS
3D structure
PDB8xaw Cryo-EM structure of DUF4297Q53AK55A-HerA-AMPPNP-DNA
ChainD
Resolution2.73 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D E228 A229 N230 H232 N233 Q234 K328 N331 E224 A225 N226 H228 N229 Q230 K324 N327
BS02 dna D R284 K287 S320 S321 R280 K283 S316 S317
BS03 ANP D T153 G154 G156 K157 S158 H159 E427 E516 S543 T149 G150 G152 K153 S154 H155 E423 E508 S535
BS04 MG D S158 E192 S154 E188
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