Structure of PDB 8x7k Chain D

Receptor sequence
>8x7kD (length=93) Species: 9606 (Homo sapiens) [Search protein sequence]
RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRL
AHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS
3D structure
PDB8x7k Capturing Snapshots of Nucleosomal H2A K13/K15 Ubiquitination Mediated by the Monomeric E3 Ligase RNF168
ChainD
Resolution3.27 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D Y42 S55 S56 R86 S87 T88 Y12 S25 S26 R56 S57 T58
BS02 dna D R33 Y40 R3 Y10
External links
PDB RCSB:8x7k, PDBe:8x7k, PDBj:8x7k
PDBsum8x7k
PubMed
UniProtO60814|H2B1K_HUMAN Histone H2B type 1-K (Gene Name=H2BC12)

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