Structure of PDB 8wy4 Chain D

Receptor sequence
>8wy4D (length=451) Species: 1053225 (Bacillus cereus VD045) [Search protein sequence]
MKFSNITIKNFRNFEKVNINLDNKNVIFGMNDIGKTNFLYALRFLLDKEI
RKFGFNKSDYHKHDTSKKIEIILTLDLSNYEKDEDTKKLISVVKGARTSA
NADVFYIALESKYDDKELYGNIILKWGSELDNLIDIPGRGNINALDNVFK
VIYINPKIVIYLIEEPEISLHRSMQIALSKQLFEQSTYKYFFLSTHSPEL
LYEMDNTRLIRVHSTEKVVCSSHMYNVEEAYGSVKKKLNKALSSALFAER
VLLIEGPSEKILFEKVLDEVEPEYELNGGFLLEVGGTYFNHYVCTLNDLG
ITHIIKTDNDLKSKKGKKGVYELLGLNRCLNLLGRENLDEITIDIPEDIK
GKKKKERLNERKKEIFKQYKNEVGEFLGERIYLSEIDLENDLYSAIGESM
KRIFENEDPVHYLQKSKLFNMVELVNNLSTKDCFDVFEHEKFACLKELVG
S
3D structure
PDB8wy4 nucleotide-sensing endonuclease
ChainD
Resolution2.81 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D K474 G475 H535 K350 G351 H411
BS02 ATP D K474 K478 K479 L482 K486 K350 K354 K355 L358 K362
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0051607 defense response to virus

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Molecular Function
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Biological Process
External links
PDB RCSB:8wy4, PDBe:8wy4, PDBj:8wy4
PDBsum8wy4
PubMed38471529
UniProtJ8H9C1|GAJA_BACC6 Endonuclease GajA (Gene Name=gajA)

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