Structure of PDB 8wt7 Chain D

Receptor sequence

>8wt7D (length=317) Species: 562 (Escherichia coli) [Search protein sequence]

LHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKIDH
AHICIEATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTV
DARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALTDMHTQELNRTET
AREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPGI
GEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSKA
GHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQ
VAYGVLKSGVPFDASRH

3D structure

PDB

8wt7 Structural mechanism of bridge RNA-guided recombination.

Chain

Resolution

2.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	D	L97 R98	L93 R94
BS02	rna	D	A61 N84 N150 R151 F222 H224 R226 Q227 F231 T235 P236 R238 S249 M251 K253 A254 G255 H256 V257 R260 R261 Y264 R283 K289 K290 K292 V293 G296 A297 R300 K301 G308 V309 S312 F316 D317 R320 H321	A57 N80 N146 R147 F218 H220 R222 Q223 F227 T231 P232 R234 S245 M247 K249 A250 G251 H252 V253 R256 R257 Y260 R279 K285 K286 K288 V289 G292 A293 R296 K297 G304 V305 S308 F312 D313 R316 H317
BS03	dna	D	S241 S243 S244	S237 S239 S240
BS04	dna	D	E153 P202 G203 G205 K207 T208 M265 V269 K273	E149 P198 G199 G201 K203 T204 M261 V265 K269
BS05	dna	D	K14 T62 N84 K89 R250 M268 S272 G291 L295	K10 T58 N80 K85 R246 M264 S268 G287 L291

External links

PDB	RCSB:8wt7, PDBe:8wt7, PDBj:8wt7
PDBsum	8wt7
PubMed	38926616
UniProt	A0A2X3M8B0

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