Structure of PDB 8wg2 Chain D

Receptor sequence
>8wg2D (length=679) Species: 376686 (Flavobacterium johnsoniae UW101) [Search protein sequence]
SDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGFTLKNDNKSL
LNDFKIEDTKTSSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMII
RFRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTAYWIPGDYDT
QEYNYSTSKLSEIRGLMEKAYTKASQTSFSPTGVQTSLMMKSQDGLYINL
HEAALINYSCMHLNLDDKNFVFESWLTPDSHGDKGKMQAPCKTPWRTVIV
SDDARNILASKLTYNLNEPSKIQETSWIKPTKYVGVWWEMISGKSTWSYT
DEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKNGFDAVLVEGWN
EGWEDWIGHEKDYVFDFVTPYPDFDIKGLNEYAHAKKVKLIMHHETSGAV
RNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQYAI
EKAADYQIMVNAHEAVRPTGIARTYPNLIGNEAARGTQYQAFGNDRNNAN
HVTILPFTRLIGGPMDYTPGIFEMDVTNGSHVNATIANQLALYVTMYSPL
QMAADFPENYERFADAFQFIKDVAVDWDDSRYLEAEPGQYITVARKAKGT
DNWFLGNVNGETARVSNIDLGFLEKGKKYTAVIYADAKDANYKTNTQAYT
IRKVVVTSNSKLSQFSASGGGYAISFYPV
3D structure
PDB8wg2 Structural insights into alpha-(1->6)-linkage preference of GH97 glucodextranase from Flavobacterium johnsoniae.
ChainD
Resolution2.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.70: glucan 1,6-alpha-glucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC D I312 W318 F513 I291 W297 F492
BS02 GLC D E171 Q509 Y510 E152 Q488 Y489
BS03 GLC D W308 E368 W374 H414 E416 K444 V448 H484 E485 E503 Q509 W287 E347 W353 H393 E395 K423 V427 H463 E464 E482 Q488
BS04 CA D E171 E485 E503 Q509 E152 E464 E482 Q488
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8wg2, PDBe:8wg2, PDBj:8wg2
PDBsum8wg2
PubMed38661728
UniProtA5FBI0

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