Structure of PDB 8wg1 Chain D

Receptor sequence
>8wg1D (length=685) Species: 376686 (Flavobacterium johnsoniae UW101) [Search protein sequence]
SDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGFTLKNDNKSL
LNDFKIEDTKTSSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMII
RFRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTAYWIPGDYDT
QEYNYSTSKLSEIRGLMEKAYTKGNASQTSFSPTGVQTSLMMKSQDGLYI
NLHEAALINYSCMHLNLDDKNFVFESWLTPDSHGDKGKMQAPCKTPWRTV
IVSDDARNILASKLTYNLNEPSKIQETSWIKPTKYVGVWWEMISGKSTWS
YTDEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKNGFDAVLVEG
WNEGWEDWIGHEKDYVFDFVTPYPDFDIKGLNEYAHAKKVKLIMHHETSG
AVRNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQY
AIEKAADYQIMVNAHEAVRPTGIARTYPNLIGNEAARGTQYQAFGNDRNN
ANHVTILPFTRLIGGPMDYTPGIFEMDVTNGSHVNATIANQLALYVTMYS
PLQMAADFPENYERFADAFQFIKDVAVDWDDSRYLEAEPGQYITVARKAK
GTDNWFLGNVNGETARVSNIDLGFLEKGKKYTAVIYADAKDANYKTNTQA
YTIRKVVVTSNSKLSQFSASGGGYAISFYPVADAA
3D structure
PDB8wg1 Structural insights into alpha-(1->6)-linkage preference of GH97 glucodextranase from Flavobacterium johnsoniae.
ChainD
Resolution2.34 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.70: glucan 1,6-alpha-glucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC D E171 N194 A195 Q509 E152 N175 A176 Q490
BS02 GLC D W308 E368 H414 E416 V448 H484 E485 E503 Q509 W289 E349 H395 E397 V429 H465 E466 E484 Q490
BS03 CA D E171 E485 E503 Q509 E152 E466 E484 Q490
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8wg1, PDBe:8wg1, PDBj:8wg1
PDBsum8wg1
PubMed38661728
UniProtA5FBI0

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