Structure of PDB 8wdb Chain D

Receptor sequence
>8wdbD (length=513) Species: 83332 (Mycobacterium tuberculosis H37Rv) [Search protein sequence]
APLLSVEGLEVTFGTDAPAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAI
LGLLPAGGRITAGRVVFDGRDITGADAKRLRSIRGREIGYVPQDPMTNLN
PVWKVGFQVTEALRANTDGRAARRRAVELLAEAGLPDPAKQAGRYPHQLS
GGMCQRALIAIGLAGRPRLLIADQPTSALDVTVQRQVLDHLQGLTDELGT
ALLLITHDLALAAQRAEAVVVVRRGVVVESGAAQSILQSPQHEYTRRLVA
AAPSLGDILVVSELTKIYRESRGAPWRRVESRAVDGVSFRLPRASTLAIV
GESGSGKSTLARMVLGLLQPTSGTVVFDGTYDVGALARDQVLAFRRRVQP
VFQNPYSSLDPMYSVFRAIEEPLRVHHVGDRRQRQRAVRELVDQVALPSS
ILGRRPRELSGGQRQRVAIARALALRPEVLVCDQAVSALDVLVQAQILDL
LADLQADLGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRP
RHEYTRQLLQAIP
3D structure
PDB8wdb Cryo-EM structure of the ATP-bound DppABCD complex
ChainD
Resolution2.86 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D F18 S44 G45 G47 K48 S49 T50 H212 R427 E431 S433 G434 G435 F13 S39 G40 G42 K43 S44 T45 H207 R404 E408 S410 G411 G412
BS02 ATP D Q153 S155 G157 Y291 S326 G329 K330 S331 T332 Q376 Q148 S150 G152 Y268 S303 G306 K307 S308 T309 Q353
BS03 MG D S49 Q98 S44 Q93
BS04 MG D S331 Q376 S308 Q353
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