Structure of PDB 8vij Chain D

Receptor sequence
>8vijD (length=116) Species: 314608 (Shewanella benthica KT99) [Search protein sequence]
SLYERLGGEQKIARIAADIFDTHATNPTVASRFKDSDRERVIKMVTEFLS
AGTGGPQDYTGKSMPEAHRSMNINEAEYLAVIDDIMVALDKNEVGDQEKQ
ELLMIAYSLKGEIIGA
3D structure
PDB8vij Crystal structure of Shewanella benthica Group 1 truncated hemoglobin Y34F C51S C71S variant in the cyanomet state
ChainD
Resolution1.35 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 HEM D F34 S37 R41 V42 F49 Y60 G62 K63 M65 H69 M72 I74 E78 Y79 V82 I114 F33 S36 R40 V41 F48 Y59 G61 K62 M64 H68 M71 I73 E77 Y78 V81 I113
Gene Ontology
Molecular Function
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0015671 oxygen transport

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8vij, PDBe:8vij, PDBj:8vij
PDBsum8vij
PubMed
UniProtA9DF82

[Back to BioLiP]