Structure of PDB 8vfy Chain D

Receptor sequence
>8vfyD (length=95) Species: 9606 (Homo sapiens) [Search protein sequence]
KRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASR
LAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
3D structure
PDB8vfy Cryo-EM structure of FoxA1 in complex with ALBN1 nucleosome (class 1)
ChainD
Resolution2.89 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D K30 R33 K34 E35 S36 I39 Y40 K1 R4 K5 E6 S7 I10 Y11
BS02 dna D I54 S55 S56 R86 S87 T88 I25 S26 S27 R57 S58 T59
External links
PDB RCSB:8vfy, PDBe:8vfy, PDBj:8vfy
PDBsum8vfy
PubMed39121853
UniProtP06899|H2B1J_HUMAN Histone H2B type 1-J (Gene Name=H2BC11)

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