Structure of PDB 8v5o Chain D

Receptor sequence
>8v5oD (length=381) Species: 8355 (Xenopus laevis) [Search protein sequence]
YDPASLPDVLPLYYRRLFPFYQYFRWLNYGGVVKNYFQHREFSFTLKDDV
YVRYQSFNNQSELEKEMQKMCPYKIDIGAVYSHRPSLHNTVKSGTFQAQE
KELVFDIDMTDYDDVRRCCSSADICPKCWTLMTIAVRILDRALAEDFGFK
HRLWVYSGRRGVHCWVCDDSARKLSQAERSAVAEYLSVVKGGEETIKKVQ
LPETIHPFIGKSLKMVERYFEKYALVDQDILENKQCWDKVIALVPEVARE
SLLREFSKARSSVERWDKLSSCLEATRRYSNIPKEIMLQFCYPRLDVNVS
KGLNHLLKSPFSVHPKTGRISVPIDCKKLDQFDPFSVPTISLICSELDNV
RTRDYKRTSLAPYIKVFEQFLDKLDQSRKGE
3D structure
PDB8v5o A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase
ChainD
Resolution8.99 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN D C123 C124 C130 C133 C118 C119 C125 C128
Gene Ontology
Molecular Function
GO:0003896 DNA primase activity
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006260 DNA replication
GO:0006269 DNA replication, synthesis of primer
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005658 alpha DNA polymerase:primase complex
GO:1990077 primosome complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8v5o, PDBe:8v5o, PDBj:8v5o
PDBsum8v5o
PubMed38491139
UniProtQ800A4

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