Structure of PDB 8tp8 Chain D

Receptor sequence
>8tp8D (length=326) Species: 565050 (Caulobacter vibrioides NA1000) [Search protein sequence]
HMRHEKATRLLDLARMLAGSAEGLTLDEMAAALGVGRRTAERMRDAVWAA
FPQMEAIDDPPTKRFRIPSGLDFQTPTAEELAALRVAADSLRASGADARA
SSLYALEAKLLSALRGSARRRVAPDVEALVQAETIAVHAGPRPYEDQAVL
GAIRAAIKGLQALSFRYEGGSTPGRTREVTPLGVLFGRSNYLVALEGKGG
KPRSWRLDRMSDLKVLDKPAPPPQDFSLQAFADESFGIYHDEIQDVVLRI
HKSRAEDALRWRFHATQQVTPEADGSVLVTFRAGGMRELSWHLFTWGDAV
EIVAPQVLKDMMVQELREAGRAHGAW
3D structure
PDB8tp8 Structure of the WYL-domain containing transcription activator, DriD, in complex with ssDNA effector and DNA target site
ChainD
Resolution2.74 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D Y168 G171 R178 R189 Y192 R204 S205 W206 R207 Y240 H241 R288 E289 W292 Y167 G170 R177 R188 Y191 R203 S204 W205 R206 Y239 H240 R287 E288 W291
BS02 dna D L25 R36 R37 R43 P60 T61 K62 L26 R37 R38 R44 P61 T62 K63
BS03 dna D R2 R8 V34 R37 T38 R41 R3 R9 V35 R38 T39 R42
External links