Structure of PDB 8stc Chain D

Receptor sequence
>8stcD (length=207) Species: 220668 (Lactiplantibacillus plantarum WCFS1) [Search protein sequence]
QRRNGFPEVIYGAGKTATQIVGIVQALSQQTLPILTTRLSAEKFAALQPA
LPTAVYHATAQCMTVGEQPAPKTPGYIAVVTAGTADQPVAEEAAVTAETF
GNRVERVYDVGVAGIHRLFAKLDVIRGARVVIVIAGMEGALASVVGGLVD
KPVIAVPTSVGYGTSFQGMTALLTMLNSCASGITVVNIDNGFGAAYSASM
VNQMASW
3D structure
PDB8stc S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zinc and soaked with bicarbonate.
ChainD
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG D G188 S223 G146 S181
Gene Ontology
Molecular Function
GO:0016740 transferase activity
Cellular Component
GO:0005886 plasma membrane

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:8stc, PDBe:8stc, PDBj:8stc
PDBsum8stc
PubMed
UniProtF9UST0|LARB_LACPL Pyridinium-3,5-biscarboxylic acid mononucleotide synthase (Gene Name=larB)

[Back to BioLiP]